Type Number of SNPs
Intergenic 1,740,250
Intron 2,453,403
Upstream 411,242
Downstream 389,553
Splice_site 16,105
Start_lost 82
Codon_change 7
Synonymous_coding 117,662
Non_synonymous_coding 49,633
Stop_gained 438
Stop_lost 78
Total 5,178,453