HLA class II alleles Method Position Sequence IL-4pred AllerTOP v. 2.0 Spatial position
HLA-DPA1*03:01/ HLA-DPB1*04:02/ HLA-DRB1*11:01/ HLA-DPA1*01:03/ HLA-DPB1*04:01 A,B,C 211-225 PFHFNSKRFQTLFKN 1.34 YES Exposed
HLA-DPA1*03:01/ HLA-DPB1*04:02/ HLA-DRB1*11:01/ HLA-DPA1*01:03/ HLA-DPB1*04:01 A,B,C 212-226 FHFNSKRFQTLFKNQ 1.34 YES Exposed
HLA-DPA1*01:03/ HLA-DPB1*04:01 C 213-227 HFNSKRFQTLFKNQY 1.32 YES Exposed
HLA-DRB5*01:01 B 221-235 TLFKNQYGHVRVLQR 0.35 YES Exposed
HLA-DRB5*01:01 B 222-236 LFKNQYGHVRVLQRF 0.34 YES Exposed
HLA-DRB5*01:01 B 223-237 FKNQYGHVRVLQRFN 0.33 YES Exposed
HLA-DRB5*01:01/ HLA-DRB1*11:01 B 225-239 NQYGHVRVLQRFNKR 1.48 YES Exposed
HLA-DRB1*11:01/ HLA-DRB5*01:01 B 226-240 QYGHVRVLQRFNKRS 1.48 YES Exposed
HLA-DRB1*04:01 B 248-262 DYRILEFNSKPNTLL 1.31 YES Inner
HLA-DRB1*04:01/ HLA-DRB5*01:01/ HLA-DRB3*02:02 B,C 249-263 YRILEFNSKPNTLLL 1.23 YES Inner
HLA-DRB3*01:01 A 262-276 LLPHHADADYLIVIL 0.22 YES Inner
HLA-DRB1*04:05 B 275-289 ILNGTAILTLVNNDD 0.25 YES Inner
HLA-DRB1*04:05 B 276-290 LNGTAILTLVNNDDR 0.25 YES Inner
HLA-DRB1*04:05 B 277-291 NGTAILTLVNNDDRD 0.26 YES Inner
HLA-DQA1*05:01/ HLA-DQB1*03:01 A 520-534 DIFVIPAGYPVVVNA 0.26 YES Inner
HLA-DQA1*05:01/ HLA-DQB1*03:01 A 521-535 IFVIPAGYPVVVNAT 0.28 YES Inner
HLA-DRB4*01:01 A 558-572 SKDNVISQIPSQVQE 0.40 YES Exposed