Marker (Test population | coordinates) |
Enzyme |
Marker quality |
ingroup |
outgroup |
Lake Managua | Chr3:33,260,056 |
HaeII |
|
402/402 (99.8%)
550/402 (96.3%) |
550/550 (73.8%) |
Lake Managua | Chr21:22,155,441 |
BclI |
- |
400/400 (98.9%)
529/400 (88.2%) |
529/529 (82.1%) |
Lake Nicaragua | Chr11:21,205,346 |
BsrI |
+ |
395/395 (98.9%)
544/395 (86.7%) |
544/544 (85.5%) |
Lake Nicaragua | Chr17:561,899 |
BsaAI |
- |
400/400 (99.2%)
551/400 (89.2%) |
551/551 (88.9%) |
Lake Apoyeque | Chr13:8,711,066 |
PleI |
++ |
607/607 (100%)
607/367 (51.3%) |
367/367 (100%) |
Lake Apoyeque | Chr11:1,877,014 |
PvuII |
+ |
585/585 (99.7%)
585/363 (59.6%) |
363/363 (99.9%) |
Lake Apoyo | Chr18:5,677,584 |
HpaII |
++++ |
523/523 (100%)
523/362 (59.4%) |
362/362 (100%) |
Lake Apoyo | Chr11:1,173,519 |
ApoI |
++++ |
402/402 (100%)
533/402 (86.5%) |
533/533 (100%) |
Lake As. Managua | Chr7:6,889,897 |
HaeII |
+++ |
480/480
(99.9%) 480/361 (84.6%) |
361/361 (99.7%) |
Lake As. Managua | Chr23:32,083,942 |
NcoI |
+ |
196/196
(100%) 557/196 (100%) |
557/557 (98.5%) |
Lake As. León | Chr18:14,951,950 |
BsaI |
++++ |
530/530
(100%) |
405/405 (100%) |
Lake As. León | Chr8:21,669,333 |
BceAI |
++++ |
500/500
(100%) |
500/188 (100%)
188/188
(100%)
|
Lake Masaya | Chr20:9,539,893 |
BccI |
++ |
400/400 (100%)
553/400 (99.5%) |
553/553 (84.7%) |
Lake Masaya | Chr11:20,264,687 |
HaeIII |
+ |
492/492 (100%)
492/363 (100%) |
363/363 (82.4%) |
Lake Tiscapa | Chr18:17,567,949 |
HphI |
++++ |
411/411 (100%) |
528/528 (100%) |
Lake Tiscapa | Chr14:11,451,235 |
AvaI |
++++ |
524/524 (100%)
524/401 (100%) |
401/401 (99.8%) |
Lake Xiloá | Chr3:13,299,069 |
BsaI |
++++ |
543/543 (100%)
543/408 (97.1%) |
408/408 (99.2%) |
Lake Xiloá | Chr14:29,887,480 |
HgaI |
- |
506/506 (99.6%)
506/377 (63.4%) |
377/377 (99.6%) |
A. citrinellus / A. labiatus | Chr8:11,495,129 |
AccI |
+ |
602/602 (98.5%) |
602/351
(71%)
351/351 (99.8%)
|
A. citrinellus / A. labiatus | Chr8:11,381,985 |
NspI |
+ |
348/348 (99.5%) 480/348 (57.4%) |
480/480 (99.1%) |
A. astorquii | Chr24:27,792,838 |
BsmI |
- |
370/370 (100%)
515/370 (96.8%) |
515/515 (94.5%) |
A. astorquii | Chr11:4,091,881
|
AlwNI
|
-
|
536/536 (99.4%)
536/389 (67%)
|
389/389 (99.2%)
|
A. chancho | Chr17:14,664,535 |
PstI |
- |
397/397 (99.9%) |
520/397 (100%) 520/520 (100%) |
A. chancho | Chr3:25,801,703 |
AciI |
++++ |
112/112 (99.5%) |
488/112 (100%)
488/488
(100%)
|
A. flaveolus | Chr15:22,314,952 |
ApoI |
- |
538/538 (95.2%) |
538/185 (100%) 185/185 (100%) |
A. flaveolus | Chr20:3,776,504 |
HinfI |
- |
524/524 (98.3%)
524/397 (74.7%) |
397/397 (91.5%) |
A. globosus | Chr3:19,696,124 |
BsaBI |
- |
536/536 (100%)
536/197 (100%) |
197/197 (100%) |
A. globosus | Chr12:23,301,195 |
HgaI |
- |
382/382 (100%)
517/382 (100%) |
517/517 (99.4%) |
A. supercilius | Chr2:17,623,789 |
RsaI |
- |
583/583 (100%)
583/199 (96.4%) |
199/199 (96.1%) |
A. zaliosus | Chr24:14,867,912 |
BbvI |
+ |
531/531 (99.9%) |
531/413 (100%)
413/413
(100%)
|
A. amarillo | Chr6:811,192 |
BsiEI |
- |
514/514 (100%)
514/169 (86.8%) |
169/169 (99.5%) |
A. sagittae | Chr18:24,041,527 |
BstAPI |
++ |
535/535 (99.3%)
535/171 (71.7%) |
171/171 (97.6%) |
A. viridis | Chr5:15,701,465 |
XcmI |
+ |
175/175 (100%)
563/175 (96.2%) |
563/563 (93.4%) |
A. viridis | Chr16:24,619,817 |
BspMI |
- |
566/566 (99.8%)
566/185 (82.3%) |
185/185 (97.8%) |
A. xiloaensis | Chr4:5,998,299 |
Tth111I |
- |
512/512 (100%)
512/155 (100%) |
155/155 (98.5%) |
A. xiloaensis | Chr8:24,801,784 |
AleI |
- |
593/593 (99.8%) |
593/391 (53.4%) 391/391 (99.9%) |