Supplemental Table 1: Runtime and memory usage by SCNIC module generation step
Modules were calculated based on correlation matrices for the Great Lakes dataset and an integrated metabolomics-microbiome (GT) dataset. Runtime was profiled using GNU Time across 3 runs per dataset and method, and maximum memory usage in mebibytes (MiB) was profiled using memory-profiler. A count table to sum module relative abundances was passed to SCNIC for the GT dataset when denoted in the leftmost column.