The inference of fine-scale recombination rates based on NGS population data
We inferred fine-scale recombination rates using pyrho [33] with population-wide NGS data, which included 27 samples from both Chinese and Indian subspecies. Different from the pedigree-based method, which can estimate the short-term signals of meiotic recombination, the fine-scale recombination rates take advantage of historical demography using the smc++ [119] and can recovery the population-wide and historical recombination at a genome-wide scale.