Figure legend
Figure.1. Charybdis japonica .
Figure.2. Genome-wide Hi-C heatmap of C. japonica . From outer
circle to inner circle: chromosome (a), gene distribution (b), GC
content of the genome (c), short Illumina read sequencing depth (d),
long PacBio read depth (e), DNA transposable element (f), and ;ong
terminal repeat (g).
Figure 3. Manhattan plot of F ST.
Figure 4. ED2 distribution.
Figure 5. Venn diagram of shared and unique gene families in four (A) or
five (B) species.
Figure 6. Number of homologous genes among the genomes of related
species.
Figure 7. Phylogenetic analysis based on 968 single-copy orthologous
genes.
Figure 8. Demographic history of C. japonica .
Figure 9. Relative evolution rate analysis of different species.
Figure 10. Overall structure (left) and schematic (right) of an SCF
ubiquitin ligase. Note: Ub: Ubiquitin; UBA: Ubiquitin activating enzyme;
UBC: Ubiquitin conjugating enzyme; RBX1: E3 ubiquitin-protein ligase.
Figure 11. Schematic of hemocyanin binding to oxygen (Markl, 2013).