References:
Boshier,
D., Broadhurst, L., Cornelius, J., Gallo, L., and Koskela, J., et al.
(2015). Is local best? Examining the evidence for local adaptation in
trees and its scale. Environmental Evidence . 4 (1).
http://doi.org/10.1186/s13750-015-0046-3
CHEN,
K., ABBOTT, R.J., MILNE, R.I., TIAN, X., and LIU, J. (2008).
Phylogeography of Pinus tabuliformis Carr. (Pinaceae), a dominant
species of coniferous forest in northern China. Molecular
ecology . 17 (19), 4276-4288.
http://doi.org/10.1111/j.1365-294x.2008.03911.x
Earl,
D.A., and Vonholdt, B.M. (2012). STRUCTURE HARVESTER: a website and
program for visualizing STRUCTURE output and implementing the Evanno
method. Conservation Genetics Resources . 4 (2), 359-361.
http://doi.org/10.1007/s12686-011-9548-7
Evanno, G.S., Regnaut, S.J., and Goudet, J. (2005). Detecting the number
of clusters of individuals using the software STRUCTURE: A simulation
study. Molecular Ecology . 14 (8), 2611-2620.
http://doi.org/10.1111/j.1365-294X.2005.02553.x
EXCOFFIER, L., and LISCHER, H.E.L. (2010). Arlequin suite ver 3.5: a new
series of programs to perform population genetics analyses under Linux
and Windows. Molecular Ecology Resources . 10 (3), 564-567.
http://doi.org/10.1111/j.1755-0998.2010.02847.x
Falush,
D., Stephens, M., Pritchard, J.K., and ABBOTT, R.J. (2003). Inference of
population structure using multilocus genotype data: linked loci and
correlated allele frequencies. Genetics . 164 (4), 1567-1587.
http://doi.org/10.1093/genetics/164.4.1567
FALUSH, D., STEPHENS, M., PRITCHARD, J.K., and ABBOTT, R.J. (2007).
Inference of population structure using multilocus genotype data:
dominant markers and null alleles. Molecular Ecology Notes . 7
(4), 574-578. http://doi.org/10.1111/j.1471-8286.2007.01758.x
Hao,
Q., de Lafontaine, G., Guo, D., Gu, H., and Hu, F.S., et al. (2018). The
critical role of local refugia in postglacial colonization of Chinese
pine: joint inferences from DNA analyses, pollen records, and species
distribution modeling. ECOGRAPHY . 41 (4), 592-606.
http://doi.org/10.1111/ecog.03096
Held,
J.P., and Patel, M.R. (2020). Functional conservation of mitochondrial
RNA levels despite divergent mtDNA organization. BMC research
notes . 13 (1), 334. http://doi.org/10.1186/s13104-020-05177-0
HUBISZ,
M.J., FALUSH, D., STEPHENS, M., PRITCHARD, J.K., and ABBOTT, R.J.
(2009). Inferring weak population structure with the assistance of
sample group information. Molecular Ecology Resources . 9 (5),
1322-1332. http://doi.org/10.1111/j.1755-0998.2009.02591.x
Jaramillo-Correa,
J.P., Beaulieu, J., and Bousquet, J. (2004). Variation in mitochondrial
DNA reveals multiple distant glacial refugia in black spruce (Picea
mariana), a transcontinental North American conifer. Molecular
ecology . 13 (9), 2735-2747.
http://doi.org/10.1111/j.1365-294X.2004.02258.x
Jaramillo-Correa,
J.P., and Bousquet, J. (2003). New evidence from mitochondrial DNA of a
progenitor-derivative species relationship between black spruce and red
spruce (Pinaceae). American journal of botany . 90 (12),
1801-1806. http://doi.org/10.3732/ajb.90.12.1801
Kang,
L., Qian, L., Zheng, M., Chen, L., and Chen, H., et al. (2021). Genomic
insights into the origin, domestication and diversification of Brassica
juncea. Nature Genetics . 53 (9), 1392-1402.
http://doi.org/10.1038/s41588-021-00922-y
Leigh, J.W., and Bryant, D. (2015). popart: full‐feature software for
haplotype network construction. Methods in Ecology and Evolution .
6 (9), 1110-1116. http://doi.org/10.1111/2041-210X.12410
Librado, P., and Rozas, J. (2009). DnaSP v5: a software for
comprehensive analysis of DNA polymorphism data. Bioinformatics .
25 (11), 1451-1452. http://doi.org/10.1093/bioinformatics/btp187
Liu, B., Zhang, K., Zhu, K., Shafi, M., and Gong, L., et al. (2020).
Population Genetics of Konosirus punctatus in Chinese Coastal Waters
Inferred From Two mtDNA Genes (COI and Cytb). Frontiers in Marine
Science . 7. http://doi.org/10.3389/fmars.2020.00534
Morgenstern, E.K. (1996). Geographic variation in forest trees : genetic
basis and application of knowledge in silvicultre.
Neale,
D.B., Sederoff, R.R., and ABBOTT, R.J. (1989). Paternal inheritance of
chloroplast DNA and maternal inheritance of mitochondrial DNA in
loblolly pine. Theoretical and Applied Genetics . 77 (2), 212-216.
Niu, S., Li, J., Bo, W., Yang, W., and Zuccolo, A., et al. (2022). The
Chinese pine genome and methylome unveil key features of conifer
evolution. Cell . 185 (1), 204-217.
http://doi.org/10.1016/j.cell.2021.12.006
Niu,
S., Li, W., and Li, Y. (2022). Chinese pine (Pinus tabuliformis Carr.).Trends in Genetics . 38 (4), 409-411.
http://doi.org/10.1016/j.tig.2022.01.006
Peakall,
R., and Smouse, P.E. (2012). GenAlEx 6.5: genetic analysis in Excel.
Population genetic software for teaching and research-an update.Bioinformatics . 28 (19), 2537-2539.
http://doi.org/10.1093/bioinformatics/bts460
Pritchard, J.K., Stephens, M.J., and Donnelly, P.J. (2000). Inference of
Population Structure Using Multilocus Genotype Data. Genetics .
155 (2), 945-959. http://doi.org/10.1093/genetics/155.2.945
Rosenberg,
J. (2007). CLUMPP: a cluster matching and permutation program for
dealing with label switching and multimodality in analysis of population
structure. Bioinformatics . 23 (14), 1801-1806.
Rosenberg, N.A. (2004). distruct: a program for the graphical display of
population structure. Molecular Ecology Notes . 4 (1).
http://doi.org/10.1046/j.1471-8286.2003.00566.x
Sudhir, K., Glen, S., Li, M., Christina, K., and Koichiro, T. (2018).
MEGA X: Molecular Evolutionary Genetics Analysis across computing
platforms. Molecular Biology & Evolution . (6), 6.
Turnball,
J.W., Griffin, A.R., and Styles, B.T. (1986). The concept of
provenance and its relationship to infraspecific classification in
forest trees . Infraspecific classification of wild and cultivated
plants.
WANG, B., MAO, J., GAO, J., ZHAO, W., and WANG, X. (2011). Colonization
of the Tibetan Plateau by the homoploid hybrid pine Pinus densata.Molecular Ecology . 20 (18), 3796-3811.
http://doi.org/10.1111/j.1365-294X.2011.05157.x
Xia, H., Wang, B., Zhao, W., Pan, J., and Mao, J., et al. (2018).
Combining mitochondrial and nuclear genome analyses to dissect the
effects of colonization, environment, and geography on population
structure in Pinus tabuliformis. Evolutionary Applications . 11
(10), 1931-1945. http://doi.org/10.1111/eva.12697
Ye, J., Zhang, Z., Wang, H., Bao, L., and Ge, J., et al. (2019).
Phylogeography of Schisandra chinensis (Magnoliaceae) Reveal Multiple
Refugia With Ample Gene Flow in Northeast China. Frontiers in
plant science . 10, 199. http://doi.org/10.3389/fpls.2019.00199
Zenni,
R.D., Dickie, I.A., Wingfield, M.J., Hirsch, H., and Crous, C.J., et al.
(2016). Evolutionary dynamics of tree invasions: complementing the
unified framework for biological invasions. AoB PLANTS . 9 (1),
w85. http://doi.org/10.1093/aobpla/plw085
Zhou, B., Zhang, Z., Li, Y., Ma, Y., and Zhang, S., et al. (2022).
Genetic diversity, genetic structure, and germplasm source of Chinese
pine in North China. European Journal of Forest Research .
http://doi.org/10.1007/s10342-022-01518-9
Chen, D. (2001). Review on the Progress of genetic improvement of Forest
trees in China. Journal of Guangxi forestry science . (S1), 13-17.
http://doi.org/10.3969/j.issn.1006-1126.2001.z1.004
Deng,
C., Guo, Y., Zhong, X., Cheng, Z., and He, G. (1981). Report on
provenance Test of Chinese Fir in Jianghua. Journal of Hunan
forestry science and technology . (03), 31-35.
Dong, T., Wang, Z., Kong, W., Zeng, J., and Ma, B., et al. (1991). Pinus
tabuliformis provenance test. JOURNAL OF HENAN FORESTRY SCIENCE
AND TECHNOLOGY ., 1-6.
Fu, Y., Zhang, X., Lian, Z., and Hu, W. (1988). Distribution
characteristics and division of natural geographical areas of Pinus
tabuliformis natural forest in Shanxi Province. Journal of Shanxi
forestry science and technology . (01), 6-15.
He,
K., Wu, W., Zhang, Z., Hu, X., and Han, F., et al. (2020). Genetic
structure variation of Pinus tabuliformis plantations in Beijing and the
differences with Shanxi mountain populations. Journal of Beijing
Forestry University . 42 (6), 33-42.
http://doi.org/10.12171/j.1000?1522.20190399
Li, S. (1983). Observation report on Seedling stage of Pinus
tabuliformis provenance Test. Journal of Gansu forestry science
and technology . (02), 13-20.
Liu,
Y., Yang, P., Han, C., Fan, J., and Li, X., et al. (2008). Variation
Analysis of solid characteristics of different provenances of Pinus
tabuliformis. Journal of Zhejiang Forestry University . (02),
163-168.
Meng,
X., Di, X., Wang, M., Zhu, S., and Zhao, T. (2013). Analysis of
relationship between genetic structure of Chinese Pine and mountain
barriers. ACTA ECOLOGICA SINICA . 33 (19), 6382-6388.
http://doi.org/10.5846 /stxb201306091527
Shang, F. (2019). Present situation and Prospect of Forest Tree
provenance Test. Journal of LiaoNing Forestry Science and
Technology . (4), 49-51, 62, 66.
http://doi.org/10.3969/j.issn.1001-1714.2019.04.016
Sun,
Z., Xiwen, W., Zhen, L., and Shaobin, Z. (1991). Preliminary study on
Young Forest stage of Pinus tabuliformis provenance Test. Journal
Liaoning of Forestry Science and Technology ., 3-8.
Wang,
H., and Jiang, Z. (1995). On the Strategy of introduction and
domestication of Forest trees in China. Forestry science . (04),
367-372. http://doi.org/CNKI:SUN:LYKE.0.1995-04-010
Wen,
D., Wang, T., Yang, J., and Fan, X. (1986). Report on provenance Test of
Pinus tabuliformis. Journal of Hebei forestry science and
technology . (02), 1-8.
Wu, W., He, K., Di, H., Niu, S., and Ma, Y., et al. (2018). Genetic
structure and geographic system of geographical population of Pinus
tabuliformis mountain range based on SSR in Shanxi Province of northern
China. Journal of Beijing Forestry University . 40 (10), 51-59.
http://doi.org/10.13332/j.1000-1522.20180057
Xu, H., Guo, G., Fen, L., and Yang, L. (1981). Relationship between
growth and Geographic-Climatic factors of Natural Forest of Pinus
tabuliformis. Journal of Beijing Forestry University . (04), 9-13.
Xu, H., Sun, Z., Guo, G., and Feng, L. (1981). Geographical Distribution
and provenance Division of Natural Forest of Pinus tabuliformis.Forestry science . (03), 258-270.
Xu, H., and Fen, L. (1978). Provenance, provenance test and provenance
region. Forestry Science and Technology Newsletter . (04), 22-24.
Xu,
H., and Tang, Q. (1984). Preliminary study on Geographic variation of
Pinus tabuliformis. (02), 57-72.
Zhang, S., Fan, J., Liu, Y., and Yang, P. (2010). Genetic variation
analysis of seedling characteristics among different provenances and
families of Pinus tabuliformis in Shaanxi Province. JOURNAL OF
NORTHWEST A&F UNIVERSITY . 38 (4), 64-70.